Research Interests

Statistical image analysis
Jump regression analysis and its applications
Statistical process control
Application of statistical tools in various scientific research


[Google Scholar Citations]

Publication of research articles in peer-reviewed journals

  1. Mukherjee, P.S., "A multi-resolution and adaptive 3-D image denoising framework with applications in medical imaging," Signal, Image and Video Processing, 2017, 11(7), 1379--1387.
  2. [Link] [Computer Code]

  3. Calderon-Garciduenas, L., Reynoso-Robles, R., Perez-Guille, B., Mukherjee, P.S., and Gonzalez-Maciel, A. "Combustion-derived nanoparticles, the neuroenteric system, cervical vagus, hyperphosphorylated alpha synuclein and tau in young Mexico City residents." Environmental Research, 2017, 159, 186--201.
  4. [Link]

  5. Gonzalez-Maciel, A., Reynoso-Robles, R., Torres-Jardon, R., Mukherjee, P.S. and Calderon-Garciduenas, L. "Combustion-Derived Nanoparticles in Key Brain Target Cells and Organelles in Young Urbanites: Culprit Hidden in Plain Sight in Alzheimer's Disease Development," Journal of Alzheimer's Disease, 2017, 59(1), 189--208.
  6. [Link]

  7. Calderon-Garciduenas, L., Gonzalez-Gonzalez, L.O., Kulesza, R.J., Fech, T.M., Perez-Guille, G., Jimenez-Bravo Luna, M.A., Soriano-Rosales, R.E., Solorio, E., Miramontes-Higuera, J., Chew, A.G.M., Bernal-Morua, A.F., Mukherjee, P.S., Torres-Jardon, R., Mills, P.C., Wilson, W.J., Perez-Guille, B. and D'Angiulli, A. "Exposures to fine particulate matter and ozone above USA standards are associated with auditory brainstem dysmorphology and abnormal auditory brainstem evoked potentials in healthy young dogs," Environmental Research, 2017, 158, 324--332.
  8. [Link]

  9. Calderon-Garciduenas, L., Avila-Ramirez, J., Calderon-Garciduenas, A., Gonzalez-Heredia, T., Acuna-Ayala, H., Chao, C.K., Thompson, C., Ruiz Ramos, R., Cortes-Gonzalez, V., Martinez -Martinez, L., Garcia-Perez, M.A., Reis, J., Mukherjee, P.S., Torres-Jardon, R. and Lachmann, I. "Cerebrospinal Fluid Biomarkers in Highly Exposed PM2.5 Urbanites: The Risk of Alzheimer's and Parkinson's Diseases in Young Mexico City Residents," Journal of Alzheimer's Disease, 2016, 54(2), 597--613.
  10. [Link]

  11. Mukherjee, P.S., "On phase II monitoring of the probability distributions of univariate continuous processes," Statistical Papers, 2016, 57(2), 539--562.
  12. [Link]

  13. Calderon-Garciduenas, L., Reynoso-Robles, R., Vargas- Martinez, J., Gomez-Maqueo-Chew, A., Perez-Guille, B., Mukherjee, P.S., Torres-Jardon, R., Perry, G. and Gonzalez-Maciel, A. "Prefrontal white matter pathology in air pollution exposed Mexico City young urbanites and their potential impact on neurovascular unit dysfunction and the development of Alzheimer's disease," Environmental Research, 2016, 146, 404--417.
  14. [Link]

  15. Calderon-Garciduenas, L., Mora-Tiscareno, A., Melo-Sanchez, G., Rodriguez-Diaz, J., Torres-Jardon, R., Styner, M., Mukherjee, P.S., Lin, W. and Jewells, V. "A Critical Proton MR Spectroscopy Marker of Alzheimer's Disease Early Neurodegenerative Change: Low Hippocampal NAA/Cr Ratio Impacts APOE e4 Mexico City Children and Their Parents," Journal of Alzheimer's Disease, 2015, 48(4), 1065--1075.
  16. [Link] [A manuscript version]

  17. Calderon-Garciduenas, L., Chao, C.K., Thompson, C., Rodriguez-Diaz, J., Franco-Lira, M., Mukherjee, P.S. and Perry, G. "CSF biomarkers: low amyloid-beta 1-42 and BDNF and high IFN gamma differentiate children exposed to Mexico City high air pollution v controls. Alzheimer's Disease Uncertainties," Journal of Alzheimer's Disease & Parkinsonism, 2015, 5(2), 189.
  18. [Link]

  19. Vojdani, A., Mukherjee, P.S., Berookhim, J. and Kharrazian, D. "Detection of antibodies against human and plant aquaporins in patients with multiple sclerosis," Autoimmune Diseases, 2015, Article ID 905208.
  20. [Link]

  21. Calderon-Garciduenas, L., Franco-Lira, M., D'Angiulli, A., Rodriguez-Diaz, J., Blaurock-Busch, E., Busch Y., Chao, C.K., Thompson, C, Mukherjee, P.S., Torres-Jardon, R. and Perry, G., "Mexico City normal weight children exposed to high concentrations of ambient PM2.5 show high blood leptin and endothelin-1, vitamin D deficiency, and food reward hormone dysregulation versus low pollution controls. Relevance for obesity and Alzheimer disease," Evironmental Research, 2015, 140, 579--592.
  22. [Link]

  23. Vojdani, A., Kharrazian, D. and Mukherjee, P.S., "Elevated levels of antibodies against xenobiotics in a subgroup of healthy subjects," Journal of Applied Toxicology, 2015, 35(4), 383--397.
  24. [Link]

  25. Mukherjee, P.S. and Qiu, P., "Image Denoising by a Local Clustering Framework," Journal of Computational and Graphical Statistics, 2015, 24(1), 254--273.
  26. [Link]

  27. Calderon-Garciduenas, L., Gonzalez-Maciel, A., Vojdani, A., Franco-Lira, M., Reynoso-Robles, R., Montesinos-Correa, H., Perez-Guille, B., Mukherjee, P.S., Torres-Jardon, R., Calderon-Garciduenas, A., and Perry, G., "The Intestinal Barrier in Air Pollution-Associated Neural Involvement in Mexico City Residents: Mind the Gut, the Evolution of a Changing Paradigm Relevant to Parkinson Disease Risk," Journal of Alzheimer's Disease & Parkinsonism, 2015, 5(1), 179.
  28. [Link]

  29. Calderon-Garciduenas, L., Vojdani, A., Busch, E.B., Busch, Y., Friedle, A., Franco-Lira, M., Mukherjee, P.S., Park, S.B., Torres-Jardon, R. and D'Angiulli, A., "Air pollution and children: Neural and tight junction antibodies and combustion metals, the role of barrier breakdown and brain immunity in neurodegeneration," Journal of Alzheimer's Disease, 2015, 43(3), 1039--1058.
  30. [Link] [A manuscript version]

  31. Vojdani, A., Kharrazian, D. and Mukherjee, P.S., "The Prevalence of Antibodies against Wheat and Milk Proteins in Blood Donors and their Contribution to Neuroimmune Reactivities," Nutrients, 2014, 6(1), 15--36.
  32. [Link]

  33. Calderon-Garciduenas, L., Mora-Tiscareno, A., Franco-Lira, M., Cross, J.V., Engle, R., Gomez-Garza, G., Jewells, V., Weili, L., Medina-Cortina, H., Solorio, E., Chao, C.K., Zhu, H., Mukherjee, P.S., Ferreira-Azevedo, L., Torres-Jardon, R. and D'Angiulli, A., "Flavonol-rich dark cocoa significantly decreases plasma endothelin-1 and improves cognitive responses in urban children," Frontiers in Experimental Pharmacology and Drug Discovery, 2013, 4(104), 1--13.
  34. [Link]

  35. Mukherjee, P.S. and Qiu, P., "Efficient Bias Correction For Magnetic Resonance Image Denoising," Statistics in Medicine, 2013, 32(12), 2079--2096.
  36. [Link]

  37. Qiu, P. and Mukherjee, P.S., "Edge Structure Preserving 3-D Image Denoising By Local Surface Approximation," IEEE Transactions on Pattern Analysis and Machine Intelligence, 2012, 34(8), 1457--1468.
  38. [Link]

  39. Mukherjee, P.S. and Qiu, P., "3-D Image Denoising By Local Smoothing And Nonparametric Regression," Technometrics, 2011, 53(2), 196--208.
  40. [Link] [Computer Code]

  41. Qiu, P. and Mukherjee, P.S., "Edge Structure Preserving Image Denoising," Signal Processing, 2010, 90(10), 2851--2862.
  42. [Link]

Publication of research articles in peer-reviewed conferences

  1. Qiu, P. and Mukherjee, P.S., "Edge Structure Preserving 3-D Image Denoising," In Applications of Mathematics and Computer Engineering (A. Zemliak and N. Mastorakis ed.), WSEAS Press, 2011, 111--116.
  2. [Link]

Ph.D. Thesis


Selected presentations of research

  1. "Phase II Monitoring of Big Data by Data Pruning", Workshop on SPC for Big Data Streams, Nankai University, Tianjin, China, July 09, 2017.

  2. Invited talk: "A Multi-resolution and Locally Adaptive 3-D Image Denoising Framework", Biostatistics Workshop: Statistical Inference for Biomedical Big Data, University of Florida at Gainesville, April 08, 2017.

  3. "An adaptive 3-D image denoising framework", The 4th Institute of Mathematical Statistics Asia Pacific Rim Meeting, The Chinese University of Hong Kong, June 30, 2016.

  4. "An efficient 3-D image denoising with applications in medical imaging", Western North American Region (WNAR) Meetings, Boise State University, USA, June 15, 2015.

  5. "On Phase II Monitoring of the Probability Distributions of Univariate Continuous Processes", Western North American Region (WNAR) Meetings, University of Hawai`i at Mānoa, USA, June 18, 2014.

  6. "Image Details Preserving Image Denoising by Local Clustering", Eastern North American Region (ENAR) Meetings, Orlando, USA, March 13, 2013.

  7. Invited talk: ``Image Denoising by Non-parametric Local Smoothing", Undergraduate Seminar, Boise State University, USA, December 07, 2012.

  8. Invited talk: ``Efficient Bias Correction For MRI Image Denoising", International Indian Statistical Association (IISA) conference, North Carolina State University, USA, April 23, 2011.